Hi, necroposting here but as this might still be an issue I'll try to clarify. The install order you are referring is for the old 3.31 version of Refinements. Since Subtledoctor took the mod under his wing it no longer overwrites HLA's so the correct order for 4.36.1 (latest) is : Rogue rebalancing (if used) > Wizard slayer rebalancing > Refinements.
I have used both old and new version of refinements with same version of WSR (1.14) without any issues, as long as you maintain correct install order.